Data sets, software, and other publication associated files
Bond JE. 2004. The Californian euctenizine spider genus Apomastus: the relationship between molecular and morphological taxonomy (Araneae: Mygalomorphae: Cyrtaucheniidae). Invertebrate Systematics, 18: 361-376. | DNA sequence alignment | Material Examined | GenBank AY621482-AY621508 - Accession information|
Hendrixson, BE, J.E. Bond. 2005. Testing species boundaries in the Antrodiaetus unicolor species complex (Araneae: Mygalomorphae: Antrodiaetidae): "Paraphyly and cryptic diversity. Molecular Phylogenetics and Evolution 36: 405-416. | Abstract | Entire Text in PDF Format | Alignment | GenBank AY896883-AY897012 - Accession Information
Bond JE. 2005. Cyrtaucheniidae In: Ubick, D., P. Paquin, P.E. Cushing, and V. Roth (eds.), Spiders of North America: An identification manual: 45-47
Bond JE. and BE Hendrixson. 2005. Ctenizdiae In: Ubick, D., P. Paquin, P.E. Cushing, and V. Roth (eds.), Spiders of North America: An identification manual: 43-44.
Bond, JE, DA Beamer, MC Hedin, & T Lamb. 2006. Combining genetic and geospatial analyses to infer population extinction in mygalomorph spiders endemic to the Los Angeles region. Animal Conservation, 9: 145-157, doi:10.1111/j.1469-1795.2006.00024.x. | Abstract | Entire Text in PDF Format | Alignment | Genbank DQ388577-DQ388595, DQ389886 | TreeBase |
Bond JE and DA Beamer. 2006. A morphometric analysis of mygalomorph spider carapace shape and its efficacy as a phylogenetic character (Araneae). Invertebrate Systematics, 20: 1-7.| Instruction file |
Bond JE and MC Hedin. 2006. A total evidence assessment of the phylogeny of the diverse North American trapdoor spider subfamily Euctenizinae (Araneae, Mygalomorphae, Cyrtaucheniidae). Molecular Phylogenetics and Evolution, 41: 70-85, doi:10.1016/j.ympev.2006.04.026. | Abstract | Entire Text in PDF Format | GenBank | Aligments and Tree Files |
Hedin, MC and JE Bond. 2006. Molecular phylogenetics of the spider infraorder Mygalomorphae using nuclear rDNA genes (18S and 28S): Conflict and agreement with the current system of classification. Molecular Phylogenetics and Evolution, 41: 454-471, doi:10.1016/j.ympev.2006.05.017.
Hendrixson, BE and JE Bond. 2007. Molecular phylogeny and biogeography of an ancient Holarctic lineage of mygalomorph spiders (Araneae: Antrodiaetidae: Antrodiaetus). Molecular Phylogenetics and Evolution, 42: 738-755, doi:10.1016/j.ympev.2006.09.010.
Stockman AK and JE Bond. Delimiting cohesion species: extreme population structuring and the role of ecological interchangeability. Molecular Ecology, accepted April 2007.
D-NOVL Software Package
Installation and user-manual (pdf document - requires Adobe Acrobat Reader)
Both the executables require LabVIEW Run-time Engine (National Instruments, see the D-NOVL User's manual).
Mac OSX build (.sit file)
Windows build (.zip file)
Bond JE. 2004. The Californian euctenizine spider genus Apomastus: the relationship between molecular and morphological taxonomy (Araneae: Mygalomorphae: Cyrtaucheniidae). Invertebrate Systematics, 18: 361-376. | DNA sequence alignment | Material Examined | GenBank AY621482-AY621508 - Accession information|
Hendrixson, BE, J.E. Bond. 2005. Testing species boundaries in the Antrodiaetus unicolor species complex (Araneae: Mygalomorphae: Antrodiaetidae): "Paraphyly and cryptic diversity. Molecular Phylogenetics and Evolution 36: 405-416. | Abstract | Entire Text in PDF Format | Alignment | GenBank AY896883-AY897012 - Accession Information
Bond JE. 2005. Cyrtaucheniidae In: Ubick, D., P. Paquin, P.E. Cushing, and V. Roth (eds.), Spiders of North America: An identification manual: 45-47
Bond JE. and BE Hendrixson. 2005. Ctenizdiae In: Ubick, D., P. Paquin, P.E. Cushing, and V. Roth (eds.), Spiders of North America: An identification manual: 43-44.
Bond, JE, DA Beamer, MC Hedin, & T Lamb. 2006. Combining genetic and geospatial analyses to infer population extinction in mygalomorph spiders endemic to the Los Angeles region. Animal Conservation, 9: 145-157, doi:10.1111/j.1469-1795.2006.00024.x. | Abstract | Entire Text in PDF Format | Alignment | Genbank DQ388577-DQ388595, DQ389886 | TreeBase |
Bond JE and DA Beamer. 2006. A morphometric analysis of mygalomorph spider carapace shape and its efficacy as a phylogenetic character (Araneae). Invertebrate Systematics, 20: 1-7.| Instruction file |
Bond JE and MC Hedin. 2006. A total evidence assessment of the phylogeny of the diverse North American trapdoor spider subfamily Euctenizinae (Araneae, Mygalomorphae, Cyrtaucheniidae). Molecular Phylogenetics and Evolution, 41: 70-85, doi:10.1016/j.ympev.2006.04.026. | Abstract | Entire Text in PDF Format | GenBank | Aligments and Tree Files |
Hedin, MC and JE Bond. 2006. Molecular phylogenetics of the spider infraorder Mygalomorphae using nuclear rDNA genes (18S and 28S): Conflict and agreement with the current system of classification. Molecular Phylogenetics and Evolution, 41: 454-471, doi:10.1016/j.ympev.2006.05.017.
Hendrixson, BE and JE Bond. 2007. Molecular phylogeny and biogeography of an ancient Holarctic lineage of mygalomorph spiders (Araneae: Antrodiaetidae: Antrodiaetus). Molecular Phylogenetics and Evolution, 42: 738-755, doi:10.1016/j.ympev.2006.09.010.
Stockman AK and JE Bond. Delimiting cohesion species: extreme population structuring and the role of ecological interchangeability. Molecular Ecology, accepted April 2007.
D-NOVL Software Package
Installation and user-manual (pdf document - requires Adobe Acrobat Reader)
Both the executables require LabVIEW Run-time Engine (National Instruments, see the D-NOVL User's manual).
Mac OSX build (.sit file)
Windows build (.zip file)